An Analysis of SARS-CoV-2 Using ViReport

The ongoing outbreak of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has resulted in millions of cases and hundreds of thousands of deaths. Given the current lack of treatments or vaccines available, it may be useful to trace the evolution and spread of the virus to better develop methods of preventative intervention. In this study, we analyzed over 4,000 full genome sequences of human SARS-CoV-2 using novel tool ViReport, an automated workflow for performing phylogenetic analyses on viral sequences and generating comprehensive molecular epidemiological reports. The complete ViReport output can be found at https://github.com/mirandajsong/ViReport-SARS-CoV-2.