Predicting Directions of Changes in Genotype Proportions Between Norovirus Seasons in Japan
2019
The
norovirusforecasting system (NOROCAST) has been developed for predicting directions of changes in genotype proportions between human
norovirus(HuNoV) seasons in Japan through modeling
herd immunityto structural protein 1 (VP1). Here 404 nearly complete genomic sequences of HuNoV were analyzed to examine whether the performance of NOROCAST could be improved by modeling
herd immunityto VP2 and non-structural proteins (NS) in addition to VP1. It was found that the applicability of NOROCAST may be extended by compensating for
unavailablesequence data and observed genotype proportions of 0 in each season. Incorporation of
herd immunityto VP2 and NS did not appear to improve the performance of NOROCAST, suggesting that VP1 may be a suitable target of vaccines.
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