Structural basis of autoinhibition and activation of the DNA-targeting ADP-ribosyltransferase pierisin-1
2017
Abstract
ADP-ribosyltransferasestransfer the ADP-ribose moiety of βNAD+ to an acceptor molecule, usually a protein that modulates the function of the acceptor. Pierisin-1 is an
ADP-ribosyltransferasefrom the cabbage butterfly
Pieris rapaeand is composed of N-terminal catalytic and C-terminal
RicinB-like domains. Curiously, it
ADP-ribosylatesthe DNA duplex, resulting in apoptosis of various cancer cells, which has raised interest in pierisin-1 as an anti-cancer agent. However, both the structure and the mechanism of DNA
ADP-ribosylationare unclear. Here, we report the crystal structures of the N-terminal catalytic domain of pierisin-1, its complex with βNAD+, and the catalytic domain with the
linkerconnecting it to the
ricinB-like domains. We found that the catalytic domain possesses a defined, positively charged region on the molecular surface, but that its overall structure is otherwise similar to those of
protein-targeting
ADP-ribosyltransferases.
Electrophoretic mobility shift assaysand site-directed mutagenesis indicated that pierisin-1 binds double-stranded but not single-stranded DNA, and that Lys122, Lys123, and Lys124, which are found in a loop, and Arg181 and Arg187, located in a basic cleft near the loop, are required for DNA binding. Furthermore, the structure of the catalytic domain with the
linkerrevealed an autoinhibitory mechanism in which the
linkeroccupies and blocks both the βNAD+- and
DNA-binding sites, suggesting that proteolytic cleavage to remove the
linkeris necessary for
enzyme catalysis. Our study provides a structural basis for the DNA-acceptor specificity of pierisin-1 and reveals that a self-regulatory mechanism is required for its activity.
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