Pindel¶

简介¶

Pindel can detect breakpoints of large deletions, medium sized insertions, inversions, tandem duplications and other structural variants at single-based resolution from next- gen sequence data. It uses a pattern growth approach to identify the breakpoints of these variants from paired-end short reads.

完整步骤¶

module load miniconda3
conda create -n mypy_py27 python=2.7
source activate mypy_py27
conda install -c bioconda pindel