WhiskyTHC¶

简介¶

WhiskyTHC includes the sophisticated microphysics framework developed at the Max Planck Institute for Gravitational Physics for the original Whisky code and uses advanced C++ programming techniques to generate optimized numerical code for a variety of numerical methods (Templated Hydrodynamics).

WhiskyTHC安装说明¶

在思源一号上自行安装WhiskyTHC¶

首先在自己的家目录下新建一个目录作为安装目录,并进入该目录：

mkdir WhiskyTHC
cd  WhiskyTHC

申请计算资源并加载所需模块：

srun -p 64c512g -n 40 --pty /bin/bash
module purge
module load gcc/9.3.0
module load hwloc/2.6.0-gcc-9.3.0
module load openmpi/4.1.1-gcc-9.3.0

复制源码包到当前目录并解压,然后进入FreeTHC目录：

cp /dssg/share/Sourcefile/hpcpzz/WhiskyTHC-20221221.tar  ./
tar xvpf ./WhiskyTHC-20221221.tar
cd FreeTHC

在Cactus/batchtools/templates/cactus目录下编写如下sjtusy.cfg配置文件：

# Whenever this version string changes, the application is configured
# and rebuilt from scratch
VERSION = 2019-09-03

CPP = cpp -DFORTRAN_DISABLE_IEEE_ARITHMETIC
FPP = cpp -DFORTRAN_DISABLE_IEEE_ARITHMETIC
CC  = gcc
CXX = g++
F77 = gfortran
F90 = gfortran

FPPFLAGS = -traditional

CPPFLAGS =
FPPFLAGS =
CFLAGS   = -g -std=gnu99
CXXFLAGS = -g -std=gnu++11
F77FLAGS = -g -fcray-pointer -m128bit-long-double -ffixed-line-length-none -fno-range-check
F90FLAGS = -g -fcray-pointer -m128bit-long-double -ffixed-line-length-none -fno-range-check

LDFLAGS = -rdynamic

DEBUG           = no
CPP_DEBUG_FLAGS = -DCARPET_DEBUG -DHRSCC_DEBUG -DTHC_DEBUG -DCPPUTILS_DEBUG
FPP_DEBUG_FLAGS = -DCARPET_DEBUG -DHRSCC_DEBUG -DTHC_DEBUG -DCPPUTILS_DEBUG
C_DEBUG_FLAGS   = -O0
CXX_DEBUG_FLAGS = -O0
F77_DEBUG_FLAGS = -O0
F90_DEBUG_FLAGS = -O0

OPTIMISE           = yes
CPP_OPTIMISE_FLAGS =
FPP_OPTIMISE_FLAGS =
C_OPTIMISE_FLAGS   = -O2
CXX_OPTIMISE_FLAGS = -O2
F77_OPTIMISE_FLAGS = -O2
F90_OPTIMISE_FLAGS = -O2

PROFILE           = no
CPP_PROFILE_FLAGS =
FPP_PROFILE_FLAGS =
C_PROFILE_FLAGS   = -pg
CXX_PROFILE_FLAGS = -pg
F77_PROFILE_FLAGS = -pg
F90_PROFILE_FLAGS = -pg

OPENMP           = yes
CPP_OPENMP_FLAGS = -fopenmp
FPP_OPENMP_FLAGS = -D_OPENMP
C_OPENMP_FLAGS   = -fopenmp
CXX_OPENMP_FLAGS = -fopenmp
F77_OPENMP_FLAGS = -fopenmp
F90_OPENMP_FLAGS = -fopenmp

WARN           = yes
CPP_WARN_FLAGS = -Wall
FPP_WARN_FLAGS = -Wall
C_WARN_FLAGS   = -Wall
CXX_WARN_FLAGS = -Wall
F77_WARN_FLAGS = -Wall
F90_WARN_FLAGS = -Wall

#BLAS_DIR = /usr
#BOOST_DIR = /usr
#FFTW3_DIR = /usr
#GSL_DIR = /usr
#HDF5_DIR = /usr
#HWLOC_DIR = /usr
#LAPACK_DIR = /usr

MPI_DIR =/dssg/opt/icelake/linux-centos8-icelake/gcc-9.3.0/openmpi-4.1.1-usre7vgur4rv6jllqd4yuf5gg57kothm
BLAS_DIR = BUILD
BOOST_DIR = BUILD
FFTW3_DIR = BUILD
GSL_DIR =  BUILD
HDF5_DIR = BUILD
HWLOC_DIR =/dssg/opt/icelake/linux-centos8-icelake/gcc-9.3.0/hwloc-2.6.0-mkqkyei3gxxtri4uaafreqteyhyj2exl
LAPACK_DIR = BUILD

PTHREADS_DIR = NO_BUILD

构建 thc 依赖库:

cd Cactus
yes | make thc THORNLIST=thornlists/full.th     options=batchtools/templates/cactus/sjtusy.cfg

构建 thc :

make -j40 thc

在pi2.0上自行安装WhiskyTHC¶

此步骤和上文完全相同；
申请计算资源并加载所需模块：

srun -N 1 -p cpu --exclusive --pty /bin/bash
module purge
module load gcc/9.2.0
module load hwloc/1.11.11-gcc-9.2.0
module load openmpi/3.1.5-gcc-9.2.0

复制源码包到当前目录并解压,然后进入FreeTHC目录：

cp /lustre/share/Sourcefile/hpcpzz/WhiskyTHC-20221221.tar  ./
tar xvpf ./WhiskyTHC-20221221.tar
cd FreeTHC

在Cactus/batchtools/templates/cactus目录下编写如下sjtupi.cfg配置文件：

# Whenever this version string changes, the application is configured
# and rebuilt from scratch
VERSION = 2019-09-03

CPP = cpp -DFORTRAN_DISABLE_IEEE_ARITHMETIC
FPP = cpp -DFORTRAN_DISABLE_IEEE_ARITHMETIC
CC  = gcc
CXX = g++
F77 = gfortran
F90 = gfortran

FPPFLAGS = -traditional

CPPFLAGS =
FPPFLAGS =
CFLAGS   = -g -std=gnu99
CXXFLAGS = -g -std=gnu++11
F77FLAGS = -g -fcray-pointer -m128bit-long-double -ffixed-line-length-none -fno-range-check
F90FLAGS = -g -fcray-pointer -m128bit-long-double -ffixed-line-length-none -fno-range-check

LDFLAGS = -rdynamic

DEBUG           = no
CPP_DEBUG_FLAGS = -DCARPET_DEBUG -DHRSCC_DEBUG -DTHC_DEBUG -DCPPUTILS_DEBUG
FPP_DEBUG_FLAGS = -DCARPET_DEBUG -DHRSCC_DEBUG -DTHC_DEBUG -DCPPUTILS_DEBUG
C_DEBUG_FLAGS   = -O0
CXX_DEBUG_FLAGS = -O0
F77_DEBUG_FLAGS = -O0
F90_DEBUG_FLAGS = -O0

OPTIMISE           = yes
CPP_OPTIMISE_FLAGS =
FPP_OPTIMISE_FLAGS =
C_OPTIMISE_FLAGS   = -O2
CXX_OPTIMISE_FLAGS = -O2
F77_OPTIMISE_FLAGS = -O2
F90_OPTIMISE_FLAGS = -O2

PROFILE           = no
CPP_PROFILE_FLAGS =
FPP_PROFILE_FLAGS =
C_PROFILE_FLAGS   = -pg
CXX_PROFILE_FLAGS = -pg
F77_PROFILE_FLAGS = -pg
F90_PROFILE_FLAGS = -pg

OPENMP           = yes
CPP_OPENMP_FLAGS = -fopenmp
FPP_OPENMP_FLAGS = -D_OPENMP
C_OPENMP_FLAGS   = -fopenmp
CXX_OPENMP_FLAGS = -fopenmp
F77_OPENMP_FLAGS = -fopenmp
F90_OPENMP_FLAGS = -fopenmp

WARN           = yes
CPP_WARN_FLAGS = -Wall
FPP_WARN_FLAGS = -Wall
C_WARN_FLAGS   = -Wall
CXX_WARN_FLAGS = -Wall
F77_WARN_FLAGS = -Wall
F90_WARN_FLAGS = -Wall

#BLAS_DIR = /usr
#BOOST_DIR = /usr
#FFTW3_DIR = /usr
#GSL_DIR = /usr
#HDF5_DIR = /usr
#HWLOC_DIR = /usr
#LAPACK_DIR = /usr

MPI_DIR =/lustre/opt/cascadelake/linux-centos7-cascadelake/gcc-9.2.0/openmpi-3.1.5-gtpczurejutqns55psqujgakh7vpzqot
BLAS_DIR = BUILD
BOOST_DIR = BUILD
FFTW3_DIR = BUILD
GSL_DIR =  BUILD
HDF5_DIR = BUILD
HWLOC_DIR =/lustre/opt/cascadelake/linux-centos7-cascadelake/gcc-9.2.0/hwloc-1.11.11-whc7fqivalihbihdrueouc4pcnzbcror
LAPACK_DIR = BUILD

PTHREADS_DIR = NO_BUILD

构建 thc 依赖库:

cd Cactus
yes | make thc THORNLIST=thornlists/full.th     options=batchtools/templates/cactus/sjtupi.cfg

构建 thc :

make -j40 thc

参考资料¶

WhiskyTHC官网

最后更新: 2024 年 10 月 14 日